Structure information

AT1 receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

4YAY

SPECIES

Homo sapiens

RESOLUTION

2.900

PREFERRED CHAIN

A

REFERENCE

10.1016/J.CELL.2015.04.011

PUBLICATION DATE

April 22, 2015

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Ligand Interaction Browser

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Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
ZD-7155 Y35 1.39x39 TM1 polar (hydrogen bond)
ZD-7155 Y35 1.39x39 TM1 Van der Waals
ZD-7155 F77 2.53x53 TM2 hydrophobic
ZD-7155 F77 2.53x53 TM2 Van der Waals
ZD-7155 W84 2.60x60 TM2 aromatic (face-to-face)
ZD-7155 W84 2.60x60 TM2 Van der Waals
ZD-7155 S105 3.29x29 TM3 Van der Waals
ZD-7155 V108 3.32x32 TM3 Van der Waals
ZD-7155 V108 3.32x32 TM3 hydrophobic
ZD-7155 S109 3.33x33 TM3 Van der Waals
ZD-7155 L112 3.36x36 TM3 Van der Waals
ZD-7155 A163 4.60x61 TM4 Van der Waals
ZD-7155 R167 4.64x65 TM4 polar (charge-assisted hydrogen bond)
ZD-7155 F182 45.52x52 ECL2 aromatic (edge-to-face)
ZD-7155 F182 45.52x52 ECL2 Van der Waals
ZD-7155 P285 7.36x35 TM7 Van der Waals
ZD-7155 I288 7.39x38 TM7 hydrophobic
ZD-7155 I288 7.39x38 TM7 Van der Waals
ZD-7155 Y292 7.43x42 TM7 Van der Waals
ZD-7155 Y292 7.43x42 TM7 hydrophobic

Ligands

ZD-7155

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Residue Diagrams

S N G F I G V V F I I S Y L T P I M V F 1 L N L A L A D L C F L L T L P L W A V Y 2 C T L L F V S A Y L N F S V S A S A I K 3 A K V T C I I I W L L A G L A S L P A 4 Y S T L I I L F P F L F G L I N K T L G L 5 M A I V L F F F F S W I P H Q I F T F L 6 L P N L C N N F Y A I C I T I P M A T 7
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ICL1 M K L K ICL1ECL1 Y R W P F ECL1ICL2 P M K S R L R R ICL2ECL2 N V F F I E N T N I T V C A F H Y E S Q N S T ECL2ICL3 Y E I Q K N K ICL3ECL3 I I R ECL3N-term M I L N S S T E D G I K R I Q D D C P K A G R N-termC-term P P K A K S H S N L S T K M S T L S Y R P S D N V S S S T K K P A P C F E V E C-term H N Y I F V M I P T L Y S I I F V V G I F G N S L V V I V I Y F Y T V A S V F L L N L A L A D L C F L L T L P L W A V Y T A M E G N Y L C K I A S A S V S F N L Y A S V F L L T C L S I D R Y L A I V H T M L V A K V T C I I I W L L A G L A S L P A I I H R L P I G L G L T K N I L G F L F P F L I I L T S Y T L I W K A L K K A P R N D D I F K I I M A I V L F F F F S W I P H Q I F T F L D V L I Q L G D C R I A D I V D T A M P I T I C I A Y F N N C L N P L F Y G F L G K K F L Q I F K R Y L L K Y
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Residue Table


GPCRdb(A)
GPCRdb(A)
AT1 receptor
TM1
1x39 1.39x39 Y35
TM2
2x53 2.53x53 F77
2x60 2.60x60 W84
TM3
3x29 3.29x29 S105
3x32 3.32x32 V108
3x33 3.33x33 S109
3x36 3.36x36 L112
TM4
4x61 4.60x61 A163
4x65 4.64x65 R167
ECL2
45x52 45.52x52 F182
TM7
7x35 7.36x35 P285
7x38 7.39x38 I288
7x42 7.43x42 Y292