Structure information

GPBA receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

7XTQ

SPECIES

Homo sapiens

RESOLUTION

3.200

PREFERRED CHAIN

R

REFERENCE

10.1073/PNAS.2117054119

PUBLICATION DATE

July 6, 2022

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Ligand Interaction Browser

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Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
CHEMBL2181246 L71 2.60x60 TM2 hydrophobic
CHEMBL2181246 L74 2.63x63 TM2 hydrophobic
CHEMBL2181246 W75 ECL1 aromatic (face-to-face)
CHEMBL2181246 F96 3.36x36 TM3 hydrophobic
CHEMBL2181246 F161 ECL2 hydrophobic
CHEMBL2181246 L166 5.39x40 TM5 hydrophobic
CHEMBL2181246 Y240 6.51x51 TM6 Van der Waals
CHEMBL2181246 Y240 6.51x51 TM6 polar (hydrogen bond)
CHEMBL2181246 S247 6.58x58 TM6 Van der Waals
CHEMBL2181246 Y251 6.62x62 TM6 hydrophobic
CHEMBL2181246 Y251 6.62x62 TM6 Van der Waals
CHEMBL2181246 L266 7.39x38 TM7 Van der Waals
CHEMBL2181246 S270 7.43x42 TM7 Van der Waals

Ligands

CHEMBL2181246

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Residue Diagrams

L N A T I I L S A L A L S L G L A G K P 1 L S L L L A G L L T G L A L P T L P G L 2 L L L N A L L S L F S F N P A L Y V L L 3 I R L A L L L T W A G P L L F A S L P A 4 S L F A A A G V A P L L L G Y V E L Y L Y 5 A G A M L L F G L C W G P Y V A T L L L 6 V P V A A A S A S G L S L L S L L T G 7
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ICL1 R R L R ICL1ECL1 W N Q S R R ECL1ICL2 P L Q P P G ICL2ECL2 W N H W T P G A N C S S Q A I F ECL2ICL3 R D E P ICL3ECL3 R P P L ECL3N-term M T P N S T G E V P S P I N-termC-term R C L Q G L W G R A S R D S P G P S I A Y H P S S Q S S V D L D L N C-term P K G A L G L S L A L A S L I I T A N L L L A L G I A W D S P P A G C F F L S L L L A G L L T G L A L P T L P G L G Y W S C L L V Y L A P N F S F L S L L A N L L L V H G E R Y M A V L R S I R L A L L L T W A G P L L F A S L P A L G P A P Y L Y L E V Y G L L L P A V G A A A F L S V R V L A T A H R Q L Q D I C R L E R A V C S A L A R A L T W R Q A R A Q A G A M L L F G L C W G P Y V A T L L L S V L A Y E Q G P G T L L S L L S L G S A S A A A V P V A M G L G D Q R W R A Y T A P A A Q
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Residue Table


GPCRdb(A)
GPCRdb(A)
GPBA receptor
TM2
2x60 2.60x60 L71
2x63 2.63x63 L74
TM3
3x36 3.36x36 F96
TM5
5x40 5.39x40 L166
TM6
6x51 6.51x51 Y240
6x58 6.58x58 S247
6x62 6.62x62 Y251
TM7
7x38 7.39x38 L266
7x42 7.43x42 S270