PDB
Resolution
3.0 Å
Released
March 22, 2023
Receptor
Class
A
Species
Homo sapiens
Ligand
Function
endothelin-1 (Human)
Agonist
Reference
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Ligand Amino Acid Generic Number Segment Interaction Type
endothelin-1 (Human) Y68 N-term Van der Waals
endothelin-1 (Human) Q72 N-term Van der Waals
endothelin-1 (Human) T73 N-term Van der Waals
endothelin-1 (Human) K74 N-term polar (charge-charge)
endothelin-1 (Human) K74 N-term polar (hydrogen bond)
endothelin-1 (Human) D133 2.57x56 TM2 Van der Waals
endothelin-1 (Human) I136 2.60x59 TM2 hydrophobic
endothelin-1 (Human) N137 2.61x60 TM2 Van der Waals
endothelin-1 (Human) K140 2.64x63 TM2 polar (hydrogen bond)
endothelin-1 (Human) L141 2.65x64 TM2 hydrophobic
endothelin-1 (Human) G144 ECL1 polar (hydrogen bond with backbone)
endothelin-1 (Human) R145 23.49x49 ECL1 Van der Waals
endothelin-1 (Human) W146 23.50x50 ECL1 Van der Waals
endothelin-1 (Human) Q165 3.32x32 TM3 Van der Waals
endothelin-1 (Human) K166 3.33x33 TM3 polar (hydrogen bond)
endothelin-1 (Human) K166 3.33x33 TM3 aromatic (pi-cation)
endothelin-1 (Human) K166 3.33x33 TM3 polar (charge-charge)
endothelin-1 (Human) V169 3.36x36 TM3 Van der Waals
endothelin-1 (Human) V227 ECL2 Van der Waals
endothelin-1 (Human) F229 ECL2 hydrophobic
endothelin-1 (Human) Y231 ECL2 hydrophobic
endothelin-1 (Human) H236 ECL2 Van der Waals
endothelin-1 (Human) K237 ECL2 Van der Waals
endothelin-1 (Human) T238 ECL2 polar (hydrogen bond)
endothelin-1 (Human) M240 45.51x51 ECL2 Van der Waals
endothelin-1 (Human) L241 45.52x52 ECL2 Van der Waals
endothelin-1 (Human) Q252 5.35x36 TM5 polar (hydrogen bond)
endothelin-1 (Human) K255 5.38x39 TM5 aromatic (pi-cation)
endothelin-1 (Human) K255 5.38x39 TM5 polar (hydrogen bond)
endothelin-1 (Human) K255 5.38x39 TM5 polar (charge-charge)
endothelin-1 (Human) L259 5.42x43 TM5 hydrophobic
endothelin-1 (Human) Y263 5.46x461 TM5 Van der Waals
endothelin-1 (Human) W319 6.48x48 TM6 hydrophobic
endothelin-1 (Human) R326 6.55x55 TM6 polar (charge-charge)
endothelin-1 (Human) R326 6.55x55 TM6 polar (hydrogen bond)
endothelin-1 (Human) K330 6.59x59 TM6 Van der Waals
endothelin-1 (Human) Y333 ECL3 Van der Waals
endothelin-1 (Human) M336 ECL3 hydrophobic
endothelin-1 (Human) L344 7.28x27 TM7 hydrophobic
endothelin-1 (Human) L348 7.32x31 TM7 hydrophobic
endothelin-1 (Human) D351 7.35x34 TM7 Van der Waals
endothelin-1 (Human) Y352 7.36x35 TM7 hydrophobic
endothelin-1 (Human) I355 7.39x38 TM7 hydrophobic

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Snake plot — Download: PNG | SVG
ICL1 K C M R ICL1ECL1 G R W P F D H ECL1ICL2 W S R V Q G I G ICL2ECL2 V M V P F E Y R G E Q H K T C M L N A T ECL2ICL3 L R I A L ICL3ECL3 N E M D K N ECL3N-term M E T L C L R A S F W L A L V G C V I S D N P E R Y S T N L S N H V D D F T T F R G T E L S F L V T T H Q P T N L V L P S N G S M H N Y C N-termC-term C C Y Q S K S L M T S V P M N G T S I Q W K N H D Q N N H N T D R S S H K D S M N C-term P Q Q T K I T S A F K Y I N T V I S C T I F I V G M V G N A T L L R I I Y Q N N G P N A L I A S L A L G D L I Y V V I D L P I N V F K L L A N D F G V F L C K L F P F L Q K S S V G I T V L N L C A L S V D R Y R A V A S I P L V T A I E I V S I W I L S F I L A I P E A I G F S K F M E F Y Q D V K D W W L F G F Y F C M P L V C T A I F Y T L M T C E M L N R R N G S S E H L K Q R R E V A K T V F C L V V I F A L C W F P L H L S R I L K K T V Y R C E L L S F L L L M D Y I G I N L A T M N S C I N P I A L Y F V S K K F Q S F K N C C L C C
Helix box plot — Download: PNG | SVG A N G V M G V I F I T C S I V T N I Y K 1 A S L A L G D L I Y V I V D L P I N V F K 2 A C L N L V T I G V S S K Q L F P F L K 3 T A I E I V S I W I L S F I L A I P E 4 Y F I A T C V L P M C F Y F G F L W W D K 5 F C L V V I F A L C W F P L H L S R I L 6 I P N I C S N M T A L N I G I Y D M L 7

GPCRdb(A)
GPCRdb(A)
ETA receptor
TM2
2x56 2.57x56 D133
2x59 2.60x59 I136
2x60 2.61x60 N137
2x63 2.64x63 K140
2x64 2.65x64 L141
ECL1
23x49 23.49x49 R145
23x50 23.50x50 W146
TM3
3x32 3.32x32 Q165
3x33 3.33x33 K166
3x36 3.36x36 V169
ECL2
45x51 45.51x51 M240
45x52 45.52x52 L241
TM5
5x36 5.35x36 Q252
5x39 5.38x39 K255
5x43 5.42x43 L259
5x461 5.46x461 Y263
TM6
6x48 6.48x48 W319
6x55 6.55x55 R326
6x59 6.59x59 K330
TM7
7x27 7.28x27 L344
7x31 7.32x31 L348
7x34 7.35x34 D351
7x35 7.36x35 Y352
7x38 7.39x38 I355