Structure information

CCR8

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

8KFY

SPECIES

Homo sapiens

RESOLUTION

3.060

PREFERRED CHAIN

R

REFERENCE

10.1126/SCIADV.ADJ7500

PUBLICATION DATE

Feb. 7, 2024

NGL is a WebGL based 3D viewer powered by MMTF.

Download PDB file

Ligand Interaction Browser

Download list in excel
Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
ZK 756326 Y42 1.39x39 TM1 hydrophobic
ZK 756326 W99 23.50x50 ECL1 hydrophobic
ZK 756326 Y113 3.32x32 TM3 hydrophobic
ZK 756326 Y114 3.33x33 TM3 polar (hydrogen bond)
ZK 756326 Y172 ECL2 Van der Waals
ZK 756326 Y172 ECL2 hydrophobic
ZK 756326 C183 45.50x50 ECL2 Van der Waals
ZK 756326 T198 5.38x39 TM5 polar (hydrogen bond)
ZK 756326 L258 6.55x55 TM6 Van der Waals
ZK 756326 E286 7.39x38 TM7 polar (charge-assisted hydrogen bond)

Ligands

ZK 756326

3D interaction viewer Download PDB file

NGL is a WebGL based 3D viewer powered by MMTF.


Residue Diagrams

S N G L L S F V F L L C Y F V A L L L K 1 L N L A L S D L L F V F S F P F Q T Y Y 2 L T I F F M S S Y F G I Y Y F G S V V K 3 G T T L C L A V W L T A I M A T I P L 4 Y C F M F I T F P I L L G L I N M K F N T 5 L I V V I A S L L F W V P F N V V L F L 6 V P N V C C H T F S I I E T V H T A Y 7
Download: PNG | SVG
ICL1 K K L R ICL1ECL1 Q W V F ECL1ICL2 A V Y A L K V R ICL2ECL2 Q V A S E D G V L Q C Y S F Y N Q Q ECL2ICL3 Q N ICL3ECL3 L D ECL3N-term M D Y T L D L S V T T V T D Y Y Y P D I F S S P C D A E L I N-termC-term S C S Q I F N Y L G R Q M P R E S C E K S S S C Q Q H S S R S S S V D Y I L C-term Q T N G K L L L A V F Y C L L F V F S L L G N S L V I L V L V V C S I T D V Y L L N L A L S D L L F V F S F P F Q T Y Y L L D G T V M C K V V S G F Y Y I G F Y S S M F F I T L M S V D R Y L A V V H T I R M G T T L C L A V W L T A I M A T I P L L V F Y T L K W K I F T N F K M N I L G L L I P F T I F M F C Y I K I L H Q L K R C H N K T K A I R L V L I V V I A S L L F W V P F N V V L F L T S L H S M H I G C S I S Q Q L T Y A T H V T E I I S F T H C C V N P V I Y A F V G E K L S E F K K H I F Q K
Download: PNG | SVG

Residue Table


GPCRdb(A)
GPCRdb(A)
CCR8
TM1
1x39 1.39x39 Y42
ECL1
23x50 23.50x50 W99
TM3
3x32 3.32x32 Y113
3x33 3.33x33 Y114
ECL2
45x50 45.50x50 C183
TM5
5x39 5.38x39 T198
TM6
6x55 6.55x55 L258
TM7
7x38 7.39x38 E286