PDB
9F34
Resolution
3.1 Å
Released
Sept. 18, 2024
Receptor
D3
Class
A
Species
Homo sapiens
Ligand
CHEMBL4551160
Function
Agonist
Reference
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Ligand Amino Acid Generic Number Segment Interaction Type
CHEMBL4551160 D110 3.32x32 TM3 polar (charge-assisted hydrogen bond)
CHEMBL4551160 V111 3.33x33 TM3 hydrophobic
CHEMBL4551160 V111 3.33x33 TM3 Van der Waals
CHEMBL4551160 C114 3.36x36 TM3 Van der Waals
CHEMBL4551160 C114 3.36x36 TM3 polar (hydrogen bond)
CHEMBL4551160 S192 5.42x43 TM5 Van der Waals
CHEMBL4551160 S196 5.46x461 TM5 Van der Waals
CHEMBL4551160 W342 6.48x48 TM6 Van der Waals
CHEMBL4551160 F345 6.51x51 TM6 Van der Waals
CHEMBL4551160 F345 6.51x51 TM6 aromatic (edge-to-face)
CHEMBL4551160 F346 6.52x52 TM6 hydrophobic
CHEMBL4551160 F346 6.52x52 TM6 Van der Waals
CHEMBL4551160 P362 7.32x31 TM7 Van der Waals
CHEMBL4551160 P362 7.32x31 TM7 hydrophobic
CHEMBL4551160 Y365 7.35x34 TM7 hydrophobic
CHEMBL4551160 Y365 7.35x34 TM7 Van der Waals
CHEMBL4551160 T369 7.39x38 TM7 Van der Waals
CHEMBL4551160 Y373 7.43x42 TM7 hydrophobic
CHEMBL4551160 Y373 7.43x42 TM7 Van der Waals

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Snake plot — Download: PNG | SVG
ICL1 R A L Q ICL1ECL1 G V W N F ECL1ICL2 P V H Y Q H G T G Q S ICL2ECL2 F N T T G D P T V C S I S ECL2ICL3 Q N S Q C N S V R P G F P Q Q T L S P D P A H L E L K R Y Y S I C Q D T A L G G P G F Q E R G G E L K R E E K T R N S L S P T I A P K L S L E V R K L S N G R L S T S L K L G P L Q P ICL3ECL3 Q T C H V ECL3N-term M A S L S Q L S G H L N Y T C G A E N S T G A S Q N-termC-term C C-term A R P H A Y Y A L S Y C A L I L A I V F G N G L V C M A V L K E T T T N Y L V V S L A V A D L L V A T L V M P W V V Y L E V T G S R I C C D V F V T L D V M M C T A S I L N L C A I S I D R Y T A V V M S C R R V A L M I T A V W V L A F A V S C P L L F G N P D F V I Y S S V V S F Y L P F G V T V L V Y A R I Y V V L K Q R R R K R I L T R R G V P L R E K K A T Q M V A I V L G A F I V C W L P F F L T H V L N T H C S P E L Y S A T T W L G Y V N S A L N P V I Y T T F N I E F L K F R K A I L S
Helix box plot — Download: PNG | SVG G N G F V I A L I L A C Y S L A Y Y A H 1 V S L A V A D L L V A L T V M P W V V Y L 2 A C L N L I S A T C M M V D L T V F V D 3 V A L M I T A V W V L A F A V S C P L 4 Y V L V T V G F P L Y F S V V S S Y I V F 5 A I V L G A F I V C W L P F F L T H V L 6 V P N L A S N V Y G L W T T A S Y L E 7

GPCRdb(A)
GPCRdb(A)
D3 receptor
TM3
3x32 3.32x32 D110
3x33 3.33x33 V111
3x36 3.36x36 C114
TM5
5x43 5.42x43 S192
5x461 5.46x461 S196
TM6
6x48 6.48x48 W342
6x51 6.51x51 F345
6x52 6.52x52 F346
TM7
7x31 7.32x31 P362
7x34 7.35x34 Y365
7x38 7.39x38 T369
7x42 7.43x42 Y373