PDB
9GE2
Resolution
2.5 Å
Released
March 5, 2025
Receptor
GPR55
Class
A
Species
Homo sapiens
Ligand
CID2440433
Function
Agonist
Reference
—

NGL is a WebGL based 3D viewer powered by MMTF.

Download PDB file
Download list in excel
Ligand Amino Acid Generic Number Segment Interaction Type
CID2440433 E98 3.29x29 TM3 polar (charge-assisted hydrogen bond)
CID2440433 F102 3.33x33 TM3 Van der Waals
CID2440433 F102 3.33x33 TM3 hydrophobic
CID2440433 V103 3.34x34 TM3 hydrophobic
CID2440433 V103 3.34x34 TM3 Van der Waals
CID2440433 Y106 3.37x37 TM3 Van der Waals
CID2440433 Y106 3.37x37 TM3 hydrophobic
CID2440433 S153 4.57x57 TM4 Van der Waals
CID2440433 I156 4.60x61 TM4 Van der Waals
CID2440433 I156 4.60x61 TM4 hydrophobic
CID2440433 Y157 4.61x62 TM4 hydrophobic
CID2440433 Y157 4.61x62 TM4 Van der Waals
CID2440433 F169 45.51x51 ECL2 Van der Waals
CID2440433 F169 45.51x51 ECL2 hydrophobic
CID2440433 M172 ECL2 polar (hydrogen bond)
CID2440433 T176 ECL2 Van der Waals
CID2440433 T176 ECL2 polar (hydrogen bond)
CID2440433 W177 ECL2 hydrophobic
CID2440433 W177 ECL2 Van der Waals
CID2440433 F182 5.39x40 TM5 hydrophobic
CID2440433 F182 5.39x40 TM5 Van der Waals
CID2440433 L185 5.42x43 TM5 hydrophobic
CID2440433 L185 5.42x43 TM5 Van der Waals
CID2440433 F246 6.55x55 TM6 Van der Waals
CID2440433 F246 6.55x55 TM6 hydrophobic
CID2440433 M274 7.39x38 TM7 polar (hydrogen bond)

NGL is a WebGL based 3D viewer powered by MMTF.

Download PDB file

Snake plot — Download: PNG | SVG
ICL1 W P D Y ICL1ECL1 Q S P ECL1ICL2 P L L V S H L R ICL2ECL2 K Y M C F H N M S D D T W ECL2ICL3 T Q D W V Q ICL3ECL3 F I V ECL3N-term M S Q Q N T S G D C L N-termC-term V Q L V L Q D T T I S R G C-term F D G V N E L M K T L Q F A V H I P T F V L G L L L N L L A I H G F S T F L K N R A A T S I Y M I N L A V F D L L L V L S L P F K M V L S Q V F P S L C T L V E C L Y F V S M Y G S V F T I C F I S M D R F L A I R Y S P R K I F G I C C T I W V L V W T G S I P I Y S F H G K V E S A K V F F P L E V F G F L L P M G I M G F C C S R S I H I L L G R R D H Q K A C I Y S I A A S L A V F V V S F L P V H L G F F L Q F L V R N S E C R A K Q S I S F F L Q L S M C F S N V N C C L D V F C Y Y F V I K E I R A R F R M N H R P S
Helix box plot — Download: PNG | SVG L N L L L G L V F T P I H V A F Q L T K 1 I N L A V F D L L L V L S L P F K M V L 2 F C I T F V S G Y M S V F Y L C E V L T 3 I F G I C C T I W V L V W T G S I P I 4 C C F G M I G M P L L F G F V E L P F F V 5 A A S L A V F V V S F L P V H L G F F L 6 F V D L C C N V N S F C M S L Q L F F 7

GPCRdb(A)
GPCRdb(A)
GPR55
TM3
3x29 3.29x29 E98
3x33 3.33x33 F102
3x34 3.34x34 V103
3x37 3.37x37 Y106
TM4
4x57 4.57x57 S153
4x61 4.60x61 I156
4x62 4.61x62 Y157
ECL2
45x51 45.51x51 F169
TM5
5x40 5.39x40 F182
5x43 5.42x43 L185
TM6
6x55 6.55x55 F246
TM7
7x38 7.39x38 M274