PDB
9JQX
Resolution
3.6 Å
Released
Oct. 1, 2025
Receptor
GABA-B-R1
Class
C
Species
Drosophila melanogaster
Ligand
Function
CGP 54626A
Antagonist
Reference
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Ligand Amino Acid Generic Number Segment Interaction Type
CGP 54626A G50 N-term Van der Waals
CGP 54626A W51 N-term hydrophobic
CGP 54626A W51 N-term aromatic (pi-cation)
CGP 54626A W51 N-term aromatic (edge-to-face)
CGP 54626A C115 N-term Van der Waals
CGP 54626A S116 N-term polar (hydrogen bond)
CGP 54626A S116 N-term polar (hydrogen bond with backbone)
CGP 54626A G137 N-term polar (hydrogen bond with backbone)
CGP 54626A A138 N-term Van der Waals
CGP 54626A S139 N-term polar (hydrogen bond)
CGP 54626A S139 N-term polar (hydrogen bond with backbone)
CGP 54626A S140 N-term Van der Waals
CGP 54626A H156 N-term polar (hydrogen bond)
CGP 54626A Y236 N-term hydrophobic
CGP 54626A W264 N-term aromatic (pi-cation)
CGP 54626A W264 N-term hydrophobic
CGP 54626A M300 N-term Van der Waals
CGP 54626A E343 N-term polar (charge-charge)
CGP 54626A E343 N-term polar (hydrogen bond)

NGL is a WebGL based 3D viewer powered by MMTF.

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Snake plot — Download: PNG | SVG
ICL1 R V I Q S S ICL1ECL1 I D G R F V S P E ECL1ICL2 T D P K K K V E ICL2ECL2 P L Q R Y L E T F P L E D P V S T T D D I K I R P E L E H C E S Q ECL2ICL3 R S I K V K Q I ICL3ECL3 A S ECL3N-term M R K D M T S D G A V T F W I F L L C L I A S P H L Q G G V A G R P D E L H I G G I F P I A G K G G W Q G G Q A C M P A T R L A L D D V N K Q P N L L P G F K L I L H S N D S E C E P G L G A S V M Y N L L Y N K P Q K L M L L A G C S T V C T T V A E A A K M W N L I V L C Y G A S S P A L S D R K R F P T L F R T H P S A T V H N P T R I K L M K K F G W S R V A I L Q Q A E E V F I S T V E D L E N R C M E A G V E I V T R Q S F L S D P T D A V R N L R R Q D A R I I V G L F Y V V A A R R V L C E M Y K Q Q L Y G R A H V W F F I G W Y E D N W Y E V N L K A E G I T C T V E Q M R I A A E G H L T T E A L M W N Q N N Q T T I S G M T A E E F R H R L N Q A L I E E G Y D I N H D R Y P E G Y Q E A P L A Y D A V W S V A L A F N K T M E R L T T G K K S L R D F T Y T D K E I A D E I Y A A M N S T Q F L G V S G V V A F S S Q G D R I A L T Q I E Q M I D G K Y E K L G Y Y D T Q L D N L S W L N T E Q W I G G K V P Q D R T I V T H V L R T V N-termC-term P K D K A E S K Y N P D S A I S K E D E E R Y Q K L V T E N E Q L Q R L I T Q K E E K I R V L R Q R L V E R G D A K G T E L N G A T G V A S A A V A T T S Q P A S L I N S S A H A T P A A T L A I T Q G E C-term S L P L F V C M C T I S S C G I F V A F A L I I F N I W N K H R H P V C N T I M L F G V I I C L I S V I L L G E Y P K I C Q A R A W L L S T G F T L A Y G A M F S K V W R V H R F T T K A K P W K L Y T M V S G L L S I D L V I L L S W Q I F D R N S M W L G L V Y G F K G L I L V F G L F L A Y E T N D S R Y V G M S I Y N V V V L C L I T A P V G M V I Q Q D A S F A F V A L A V I F C C F L S M L L I F V P K V I E V I R H
Helix box plot — Download: PNG | SVG F A V F I G C S S I T C M C V F L P L S 1 T I M L F G V I I C L I S V I L L G 2 S F M A G Y A L T F G T S L L W A R A Q 3 L Y T M V S G L L S I D L V I L L S W Q 4 A L F L G F V L I L G K F G Y V L G L W 5 G M S I Y N V V V L C L I T A P V G M V 6 L M S L F C C F I V A L A V F A F S A 7

GPCRdb(A)
GPCRdb(C)
GABA-B-R1